Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00069.203.v1.0.g
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Position
AmTr_scaff00069:3480697-3484264 (-)
3567bp
Gene Type
gene
Gene Description (Protein Product)
xyloglucan galactosyltransferase
Organism
Amborella trichopoda
Also AS AT5G62220AMTR_s00069p00194320

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00077.234.v1.0.g Belongs to the glycosyltransferase 8 family
AmTr_scaff00088.76.v1.0.g Protein ALTERED XYLOGLUCAN
AmTr_scaff00080.84.v1.0.g Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls
Regulatory gene
AmTr_scaff00001.225.v1.0.g Floral homeotic protein
AmTr_scaff00001.409.v1.0.g MADS-box protein
AmTr_scaff00001.413.v1.0.g MADS-box transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000271 polysaccharide biosynthetic process BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005794 Golgi apparatus CC
GO:0005975 carbohydrate metabolic process BP
GO:0005976 polysaccharide metabolic process BP
GO:0006073 cellular glucan metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008378 galactosyltransferase activity MF
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009250 glucan biosynthetic process BP
GO:0009969 xyloglucan biosynthetic process BP
GO:0009987 cellular process BP
GO:0010383 cell wall polysaccharide metabolic process BP
GO:0010410 hemicellulose metabolic process BP
GO:0010411 xyloglucan metabolic process BP
GO:0012505 endomembrane system CC
GO:0016051 carbohydrate biosynthetic process BP
GO:0016740 transferase activity MF
GO:0016757 glycosyltransferase activity MF
GO:0016758 hexosyltransferase activity MF
GO:0033692 cellular polysaccharide biosynthetic process BP
GO:0034637 cellular carbohydrate biosynthetic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044036 cell wall macromolecule metabolic process BP
GO:0044042 glucan metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044262 cellular carbohydrate metabolic process BP
GO:0044264 cellular polysaccharide metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0071554 cell wall organization or biogenesis BP
GO:0071704 organic substance metabolic process BP
GO:1901576 organic substance biosynthetic process BP