Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00190.7.v1.0.g
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Position
AmTr_scaff00190:104798-105810 (+)
1012bp
Gene Type
gene
Gene Description (Protein Product)
Cytochrome C oxidase assembly protein
Organism
Amborella trichopoda
Also AS AT5G56090AMTR_s00190p00021950

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff05659.2.v1.0.g Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1
AmTr_scaff04574.1.v1.0.g Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1
AmTr_scaff00334.7.v1.0.g NDH shuttles electrons from NAD(P)H plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004129 cytochrome-c oxidase activity MF
GO:0005215 transporter activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005740 mitochondrial envelope CC
GO:0005743 mitochondrial inner membrane CC
GO:0006091 generation of precursor metabolites and energy BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006778 porphyrin-containing compound metabolic process BP
GO:0006779 porphyrin-containing compound biosynthetic process BP
GO:0006783 heme biosynthetic process BP
GO:0006784 heme A biosynthetic process BP
GO:0006790 sulfur compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0009055 electron transfer activity MF
GO:0009058 biosynthetic process BP
GO:0009987 cellular process BP
GO:0015002 obsolete heme-copper terminal oxidase activity MF
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015077 inorganic cation transmembrane transporter activity MF
GO:0015078 proton transmembrane transporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015672 inorganic cation transmembrane transport BP
GO:0015980 energy derivation by oxidation of organic compounds BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016043 cellular component organization BP
GO:0016226 iron-sulfur cluster assembly BP
GO:0016491 oxidoreductase activity MF
GO:0016651 oxidoreductase activity, acting on NAD(P)H MF
GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor MF
GO:0016675 oxidoreductase activity, acting on a heme group of donors MF
GO:0016676 obsolete oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019866 organelle inner membrane CC
GO:0022607 cellular component assembly BP
GO:0022857 transmembrane transporter activity MF
GO:0022890 inorganic cation transmembrane transporter activity MF
GO:0022900 electron transport chain BP
GO:0022904 respiratory electron transport chain BP
GO:0031090 organelle membrane CC
GO:0031163 metallo-sulfur cluster assembly BP
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031300 obsolete intrinsic component of organelle membrane CC
GO:0031301 obsolete integral component of organelle membrane CC
GO:0031304 obsolete intrinsic component of mitochondrial inner membrane CC
GO:0031305 obsolete integral component of mitochondrial inner membrane CC
GO:0031966 mitochondrial membrane CC
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0032592 obsolete integral component of mitochondrial membrane CC
GO:0033013 tetrapyrrole metabolic process BP
GO:0033014 tetrapyrrole biosynthetic process BP
GO:0034220 monoatomic ion transmembrane transport BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042168 heme metabolic process BP
GO:0042440 pigment metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044455 obsolete mitochondrial membrane part CC
GO:0044464 obsolete cell part CC
GO:0044571 [2Fe-2S] cluster assembly BP
GO:0045333 cellular respiration BP
GO:0046148 pigment biosynthetic process BP
GO:0046160 heme a metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0048037 obsolete cofactor binding MF
GO:0051179 localization BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051188 obsolete cofactor biosynthetic process BP
GO:0051234 establishment of localization BP
GO:0051536 iron-sulfur cluster binding MF
GO:0051537 2 iron, 2 sulfur cluster binding MF
GO:0051540 metal cluster binding MF
GO:0055085 transmembrane transport BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0098573 obsolete intrinsic component of mitochondrial membrane CC
GO:0098655 monoatomic cation transmembrane transport BP
GO:0098660 inorganic ion transmembrane transport BP
GO:0098662 inorganic cation transmembrane transport BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1902600 proton transmembrane transport BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00860 Porphyrin and chlorophyll metabolism -
map00190 Oxidative phosphorylation -