Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Bpev01.c0171.g0017
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Position
Contig171:288306-302107 (-)
13801bp
Gene Type
gene
Gene Description (Protein Product)
Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Organism
Betula pendula
Also AS AT5G62000

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Bpev01.c0353.g0024 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Bpev01.c0332.g0010 Topless-related protein
Bpev01.c0245.g0053 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Regulatory gene
Bpev01.c0428.g0006 GAGA binding protein-like family
Bpev01.c0718.g0004 Protein BASIC PENTACYSTEINE2-like
Bpev01.c1638.g0014 Protein BASIC PENTACYSTEINE4-like
Target gene
Bpev01.c0000.g0009 Cysteine-rich repeat secretory protein
Bpev01.c0000.g0010 Mitochondrial import receptor subunit
Bpev01.c0000.g0011

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map04075 Plant hormone signal transduction -