Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Bpev01.c0281.g0016
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Position
Contig281:148256-150850 (+)
2594bp
Gene Type
gene
Gene Description (Protein Product)
Pectate lyase
Organism
Betula pendula
Also AS AT5G15110

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Bpev01.c1723.g0005 Acts in the modification of cell walls via demethylesterification of cell wall pectin
Bpev01.c0777.g0007 Polygalacturonase
Bpev01.c1543.g0003 Polygalacturonase-like
Regulatory gene
Bpev01.c0015.g0225 ZINC FINGER protein
Bpev01.c0027.g0145 Dof zinc finger protein
Bpev01.c0121.g0036 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -