PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Bpev01.c1717.g0002 View in Genome Browser
Position	Contig1717:55945-61483 (-) 5538bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the PTH family
Organism	Betula pendula
Also AS	AT5G19830

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Bpev01.c2324.g0003 Peptidyl-prolyl cis-trans isomerase Bpev01.c3623.g0002 RNA-binding protein Bpev01.c5265.g0002 Belongs to the transferase hexapeptide repeat family
Regulatory gene	Bpev01.c0000.g0173 Protein SENSITIVE TO PROTON RHIZOTOXICITY Bpev01.c0015.g0225 ZINC FINGER protein Bpev01.c0027.g0145 Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004045	aminoacyl-tRNA hydrolase activity	MF
GO:0016787	hydrolase activity	MF
GO:0016788	hydrolase activity, acting on ester bonds	MF
GO:0052689	carboxylic ester hydrolase activity	MF
GO:0140098	catalytic activity, acting on RNA	MF
GO:0140101	catalytic activity, acting on a tRNA	MF