PPGR - Gene Detail

Basic Information

Gene ID	Bpev01.c1845.g0001 View in Genome Browser
Position	Contig1845:5261-22555 (+) 17294bp
Gene Type	gene
Gene Description (Protein Product)	Serrate RNA effector
Organism	Betula pendula
Also AS	AT2G27100

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Bpev01.c1871.g0005 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

Bpev01.c1845.g0001 Serrate RNA effector

Bpev01.c1968.g0002 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

Regulatory gene

Bpev01.c0000.g0005 Protein PHR1-LIKE 1-like isoform

Bpev01.c0000.g0060 Transcription factor

Bpev01.c0000.g0173 Protein SENSITIVE TO PROTON RHIZOTOXICITY

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

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