Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Bpev01.c1885.g0005
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Position
Contig1885:78153-83266 (-)
5113bp
Gene Type
gene
Gene Description (Protein Product)
"hmr
Organism
Betula pendula
Also AS AT2G34640

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Bpev01.c1989.g0006 Superoxide dismutase fe
Bpev01.c1936.g0010 ATP-dependent zinc metalloprotease
Bpev01.c2104.g0005 function DUF861, cupin-3 (InterPro IPR008579), RmlC-like jelly roll fold (InterPro IPR014710)
Regulatory gene
Bpev01.c0428.g0006 GAGA binding protein-like family
Bpev01.c0718.g0004 Protein BASIC PENTACYSTEINE2-like
Bpev01.c1638.g0014 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003697 single-stranded DNA binding MF
GO:0003723 RNA binding MF
GO:0003727 single-stranded RNA binding MF
GO:0005488 binding MF
GO:0008150 biological_process BP
GO:0010468 regulation of gene expression BP
GO:0019222 regulation of metabolic process BP
GO:0050789 regulation of biological process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF