Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Bpev01.c2201.g0005
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Position
Contig2201:41809-44740 (-)
2931bp
Gene Type
gene
Gene Description (Protein Product)
Transcription initiation factor TFIID subunit
Organism
Betula pendula
Also AS AT4G34340

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Bpev01.c2368.g0001 Transcription initiation factor TFIID subunit
Bpev01.c2611.g0001 Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase
Bpev01.c2255.g0003 Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity
Regulatory gene
Bpev01.c0428.g0006 GAGA binding protein-like family
Bpev01.c0718.g0004 Protein BASIC PENTACYSTEINE2-like
Bpev01.c1638.g0014 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map03022 Basal transcription factors -