PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Bpev01.c2874.g0001 View in Genome Browser
Position	Contig2874:11952-15684 (+) 3732bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the EF-1-beta EF-1-delta family
Organism	Betula pendula
Also AS	AT2G18110

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Bpev01.c3010.g0003 Required for the assembly and or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits Bpev01.c2874.g0001 Belongs to the EF-1-beta EF-1-delta family
Regulatory gene	Bpev01.c0015.g0225 ZINC FINGER protein Bpev01.c0027.g0145 Dof zinc finger protein Bpev01.c0089.g0050 B3 domain-containing protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC