Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Bpev01.c4836.g0001
View in Genome Browser
Position
Contig4836:47-2113 (+)
2066bp
Gene Type
gene
Gene Description (Protein Product)
acetoacetic acid catabolic process
Organism
Betula pendula
Also AS AT5G47720

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Bpev01.c5244.g0001 CoA transferase having broad substrate specificity for short-chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons
Bpev01.c4997.g0001 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
Bpev01.c5124.g0001 glycol catabolic process

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003985 acetyl-CoA C-acetyltransferase activity MF
GO:0003988 acetyl-CoA C-acyltransferase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0006082 organic acid metabolic process BP
GO:0006091 generation of precursor metabolites and energy BP
GO:0006629 lipid metabolic process BP
GO:0006631 fatty acid metabolic process BP
GO:0006635 fatty acid beta-oxidation BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009062 fatty acid catabolic process BP
GO:0009987 cellular process BP
GO:0016042 lipid catabolic process BP
GO:0016043 cellular component organization BP
GO:0016054 organic acid catabolic process BP
GO:0016407 acetyltransferase activity MF
GO:0016408 C-acyltransferase activity MF
GO:0016453 C-acetyltransferase activity MF
GO:0016740 transferase activity MF
GO:0016746 acyltransferase activity MF
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups MF
GO:0017144 xenobiotic metabolic process BP
GO:0019395 fatty acid oxidation BP
GO:0019626 short-chain fatty acid catabolic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0022607 cellular component assembly BP
GO:0030258 lipid modification BP
GO:0032787 monocarboxylic acid metabolic process BP
GO:0034440 lipid oxidation BP
GO:0042737 xenobiotic catabolic process BP
GO:0042802 identical protein binding MF
GO:0043436 oxoacid metabolic process BP
GO:0043438 acetoacetic acid metabolic process BP
GO:0043442 acetoacetic acid catabolic process BP
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044242 cellular lipid catabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044282 small molecule catabolic process BP
GO:0046395 carboxylic acid catabolic process BP
GO:0046459 short-chain fatty acid metabolic process BP
GO:0046950 cellular ketone body metabolic process BP
GO:0046952 ketone body catabolic process BP
GO:0051259 protein complex oligomerization BP
GO:0051260 protein homooligomerization BP
GO:0051262 protein tetramerization BP
GO:0051289 protein homotetramerization BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0065003 protein-containing complex assembly BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072329 monocarboxylic acid catabolic process BP
GO:1901568 fatty acid derivative metabolic process BP
GO:1901569 fatty acid derivative catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1902224 ketone body metabolic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00900 Terpenoid backbone biosynthesis Terpenoids, also known as isoprenoids, are a large class of natural products consisting of isoprene (C5) units. There are two biosynthetic pathways, the mevalonate pathway [MD:M00095] and the non-mevalonate pathway or the MEP/DOXP pathway [MD:M00096], for the terpenoid building blocks: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). The action of prenyltransferases then generates higher-order building blocks: geranyl diphosphate (GPP), farsenyl diphosphate (FPP), and geranylgeranyl diphosphate (GGPP), which are the precursors of monoterpenoids (C10), sesquiterpenoids (C15), and diterpenoids (C20), respectively. Condensation of these building blocks gives rise to the precursors of sterols (C30) and carotenoids (C40). The MEP/DOXP pathway is absent in higher animals and fungi, but in green plants the MEP/DOXP and mevalonate pathways co-exist in separate cellular compartments. The MEP/DOXP pathway, operating in the plastids, is responsible for the formation of essential oil monoterpenes and linalyl acetate, some sesquiterpenes, diterpenes, and carotenoids and phytol. The mevalonate pathway, operating in the cytosol, gives rise to triterpenes, sterols, and most sesquiterpenes.
map00650 Butanoate metabolism -
map00630 Glyoxylate and dicarboxylate metabolism -
map00620 Pyruvate metabolism -
map00380 Tryptophan metabolism -
map00310 Lysine degradation -
map00280 Valine, leucine and isoleucine degradation -
map00071 Fatty acid metabolism -