PPGR - Gene Detail

Basic Information

Gene ID	Bpev01.c5135.g0002 View in Genome Browser
Position	Contig5135:571-1536 (-) 965bp
Gene Type	gene
Gene Description (Protein Product)	Glutamate-1-semialdehyde aminotransferase
Organism	Betula pendula
Also AS	AT3G48730

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Bpev01.c5487.g0003 Catalyzes the oxidation of L-aspartate to iminoaspartate

Bpev01.c5222.g0002 enzyme of heme biosynthesis

Bpev01.c5160.g0002 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. To a lesser extent, is able to slowly catalyze the deamination of L-threonine into alpha-ketobutyrate and that of L- serine and 3-chloroalanine into pyruvate. Is also able to rapidly convert vinylglycine to threonine, which proves that the pyridoxal p-quinonoid of vinylglycine is an intermediate in the TS reaction

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006778	porphyrin-containing compound metabolic process	BP
GO:0006779	porphyrin-containing compound biosynthetic process	BP
GO:0006782	protoporphyrinogen IX biosynthetic process	BP
GO:0006783	heme biosynthetic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0016853	isomerase activity	MF
GO:0016866	intramolecular transferase activity	MF
GO:0016869	intramolecular transferase activity, transferring amino groups	MF
GO:0018130	heterocycle biosynthetic process	BP
GO:0019438	aromatic compound biosynthetic process	BP
GO:0033013	tetrapyrrole metabolic process	BP
GO:0033014	tetrapyrrole biosynthetic process	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0042168	heme metabolic process	BP
GO:0042286	glutamate-1-semialdehyde 2,1-aminomutase activity	MF
GO:0042440	pigment metabolic process	BP
GO:0042802	identical protein binding	MF
GO:0044237	cellular metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0046148	pigment biosynthetic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0046501	protoporphyrinogen IX metabolic process	BP
GO:0051186	obsolete cofactor metabolic process	BP
GO:0051188	obsolete cofactor biosynthetic process	BP
GO:0071704	organic substance metabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00860	Porphyrin and chlorophyll metabolism	-