Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Bpev01.c5228.g0004
View in Genome Browser
Position
Contig5228:2792-4922 (+)
2130bp
Gene Type
gene
Gene Description (Protein Product)
Part of a cation efflux system that mediates resistance to copper and silver
Organism
Betula pendula
Also AS

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Bpev01.c5501.g0001 pts system
Bpev01.c5311.g0002 Transcriptional regulator
Bpev01.c5245.g0001 Methyl-accepting chemotaxis protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000041 transition metal ion transport BP
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005375 copper ion transmembrane transporter activity MF
GO:0005488 binding MF
GO:0005507 copper ion binding MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0006825 copper ion transport BP
GO:0006873 intracellular monoatomic ion homeostasis BP
GO:0006875 obsolete intracellular metal ion homeostasis BP
GO:0006878 intracellular copper ion homeostasis BP
GO:0006950 response to stress BP
GO:0008150 biological_process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0009636 response to toxic substance BP
GO:0009987 cellular process BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010272 response to silver ion BP
GO:0010273 detoxification of copper ion BP
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015679 plasma membrane copper ion transport BP
GO:0019725 cellular homeostasis BP
GO:0022857 transmembrane transporter activity MF
GO:0022890 inorganic cation transmembrane transporter activity MF
GO:0030001 metal ion transport BP
GO:0030003 intracellular monoatomic cation homeostasis BP
GO:0030288 outer membrane-bounded periplasmic space CC
GO:0030313 cell envelope CC
GO:0031975 envelope CC
GO:0034220 monoatomic ion transmembrane transport BP
GO:0035434 copper ion transmembrane transport BP
GO:0042221 response to chemical BP
GO:0042592 homeostatic process BP
GO:0042597 periplasmic space CC
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0044464 obsolete cell part CC
GO:0046688 response to copper ion BP
GO:0046872 metal ion binding MF
GO:0046873 metal ion transmembrane transporter activity MF
GO:0046914 transition metal ion binding MF
GO:0046915 transition metal ion transmembrane transporter activity MF
GO:0046916 obsolete intracellular transition metal ion homeostasis BP
GO:0048878 chemical homeostasis BP
GO:0050801 monoatomic ion homeostasis BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055065 obsolete metal ion homeostasis BP
GO:0055070 copper ion homeostasis BP
GO:0055076 obsolete transition metal ion homeostasis BP
GO:0055080 monoatomic cation homeostasis BP
GO:0055082 intracellular chemical homeostasis BP
GO:0055085 transmembrane transport BP
GO:0060003 copper ion export BP
GO:0061687 detoxification of inorganic compound BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0097501 stress response to metal ion BP
GO:0098655 monoatomic cation transmembrane transport BP
GO:0098660 inorganic ion transmembrane transport BP
GO:0098662 inorganic cation transmembrane transport BP
GO:0098754 detoxification BP
GO:0098771 inorganic ion homeostasis BP
GO:1990169 stress response to copper ion BP