PPGR - Gene Detail

Basic Information

Gene ID	Bpev01.c5431.g0001 View in Genome Browser
Position	Contig5431:233-922 (-) 689bp
Gene Type	gene
Gene Description (Protein Product)	Transcriptional regulator
Organism	Betula pendula
Also AS

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Bpev01.c5581.g0003 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Bpev01.c5526.g0001 Cation acetate symporter ActP

Bpev01.c5592.g0003 Activates expression of the rhaSR operon in response to L-rhamnose

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005975	carbohydrate metabolic process	BP
GO:0006082	organic acid metabolic process	BP
GO:0006355	regulation of DNA-templated transcription	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0016052	carbohydrate catabolic process	BP
GO:0016054	organic acid catabolic process	BP
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0019520	aldonic acid metabolic process	BP
GO:0019583	galactonate metabolic process	BP
GO:0019584	galactonate catabolic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044262	cellular carbohydrate metabolic process	BP
GO:0044275	cellular carbohydrate catabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0046176	aldonic acid catabolic process	BP
GO:0046395	carboxylic acid catabolic process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051252	regulation of RNA metabolic process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0071704	organic substance metabolic process	BP
GO:0072329	monocarboxylic acid catabolic process	BP
GO:0080090	regulation of primary metabolic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1903506	regulation of nucleic acid-templated transcription	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2001141	regulation of RNA biosynthetic process	BP