Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Bpev01.c5526.g0002
View in Genome Browser
Position
Contig5526:1170-2372 (-)
1202bp
Gene Type
gene
Gene Description (Protein Product)
"Catalyzes the conversion of acetate into acetyl-CoA (AcCoA)
Organism
Betula pendula
Also AS AT5G36880

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Bpev01.c5526.g0002 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. Acs undergoes a two-step reaction. In the first half reaction, Acs combines acetate with ATP to form acetyl- adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003987 acetate-CoA ligase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006082 organic acid metabolic process BP
GO:0006083 acetate metabolic process BP
GO:0006084 acetyl-CoA metabolic process BP
GO:0006085 acetyl-CoA biosynthetic process BP
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006163 purine nucleotide metabolic process BP
GO:0006164 purine nucleotide biosynthetic process BP
GO:0006464 protein modification process BP
GO:0006473 protein acetylation BP
GO:0006476 protein deacetylation BP
GO:0006637 acyl-CoA metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006732 obsolete coenzyme metabolic process BP
GO:0006753 nucleoside phosphate metabolic process BP
GO:0006790 sulfur compound metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009058 biosynthetic process BP
GO:0009108 obsolete coenzyme biosynthetic process BP
GO:0009117 nucleotide metabolic process BP
GO:0009150 purine ribonucleotide metabolic process BP
GO:0009152 purine ribonucleotide biosynthetic process BP
GO:0009165 nucleotide biosynthetic process BP
GO:0009259 ribonucleotide metabolic process BP
GO:0009260 ribonucleotide biosynthetic process BP
GO:0009987 cellular process BP
GO:0016054 organic acid catabolic process BP
GO:0016405 CoA-ligase activity MF
GO:0016787 hydrolase activity MF
GO:0016874 ligase activity MF
GO:0016877 ligase activity, forming carbon-sulfur bonds MF
GO:0016878 acid-thiol ligase activity MF
GO:0016999 antibiotic metabolic process BP
GO:0017001 antibiotic catabolic process BP
GO:0017144 xenobiotic metabolic process BP
GO:0018130 heterocycle biosynthetic process BP
GO:0018193 peptidyl-amino acid modification BP
GO:0018205 peptidyl-lysine modification BP
GO:0018394 peptidyl-lysine acetylation BP
GO:0019213 deacetylase activity MF
GO:0019427 acetyl-CoA biosynthetic process from acetate BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019538 protein metabolic process BP
GO:0019637 organophosphate metabolic process BP
GO:0019693 ribose phosphate metabolic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0032787 monocarboxylic acid metabolic process BP
GO:0033558 protein lysine deacetylase activity MF
GO:0033865 nucleoside bisphosphate metabolic process BP
GO:0033866 nucleoside bisphosphate biosynthetic process BP
GO:0033875 ribonucleoside bisphosphate metabolic process BP
GO:0034030 ribonucleoside bisphosphate biosynthetic process BP
GO:0034032 purine nucleoside bisphosphate metabolic process BP
GO:0034033 purine nucleoside bisphosphate biosynthetic process BP
GO:0034421 post-translational protein acetylation BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034654 nucleobase-containing compound biosynthetic process BP
GO:0035383 thioester metabolic process BP
GO:0035384 thioester biosynthetic process BP
GO:0035601 protein deacylation BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043412 macromolecule modification BP
GO:0043436 oxoacid metabolic process BP
GO:0043543 protein acylation BP
GO:0043603 amide metabolic process BP
GO:0043604 amide biosynthetic process BP
GO:0043687 post-translational protein modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044272 sulfur compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044282 small molecule catabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045733 acetate catabolic process BP
GO:0046390 ribose phosphate biosynthetic process BP
GO:0046395 carboxylic acid catabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0050218 propionate-CoA ligase activity MF
GO:0051186 obsolete cofactor metabolic process BP
GO:0051188 obsolete cofactor biosynthetic process BP
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0071616 acyl-CoA biosynthetic process BP
GO:0071704 organic substance metabolic process BP
GO:0072329 monocarboxylic acid catabolic process BP
GO:0072521 purine-containing compound metabolic process BP
GO:0072522 purine-containing compound biosynthetic process BP
GO:0090407 organophosphate biosynthetic process BP
GO:0098732 macromolecule deacylation BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901293 nucleoside phosphate biosynthetic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901575 organic substance catabolic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00640 Propanoate metabolism -
map00630 Glyoxylate and dicarboxylate metabolism -
map00620 Pyruvate metabolism -
map00010 Glycolysis / Gluconeogenesis Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which often corresponds to operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].