Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Bpev01.c5586.g0002
View in Genome Browser
Position
Contig5586:2608-3165 (+)
557bp
Gene Type
gene
Gene Description (Protein Product)
First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Organism
Betula pendula
Also AS AT4G18270

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Bpev01.c5612.g0002 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C
Bpev01.c5612.g0003 D-alanyl-D-alanine carboxypeptidase

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000270 peptidoglycan metabolic process BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0006022 aminoglycan metabolic process BP
GO:0006023 aminoglycan biosynthetic process BP
GO:0006024 glycosaminoglycan biosynthetic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity MF
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009252 peptidoglycan biosynthetic process BP
GO:0009273 peptidoglycan-based cell wall biogenesis BP
GO:0009987 cellular process BP
GO:0016020 membrane CC
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016780 phosphotransferase activity, for other substituted phosphate groups MF
GO:0030203 glycosaminoglycan metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0042546 cell wall biogenesis BP
GO:0043170 macromolecule metabolic process BP
GO:0044036 cell wall macromolecule metabolic process BP
GO:0044038 cell wall macromolecule biosynthetic process BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0070589 cellular component macromolecule biosynthetic process BP
GO:0071554 cell wall organization or biogenesis BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map01100 Metabolic pathways -