PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	CSS0004975.g View in Genome Browser
Position	Chr2:111666204-111672477 (+) 6273bp
Gene Type	gene
Gene Description (Protein Product)	Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond
Organism	Camellia sinensis
Also AS	AT3G15730

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	CSS0021641.g Guanine nucleotide-binding protein alpha-1 CSS0016644.g Guanine nucleotide-binding protein alpha-1 CSS0007779.g GTP binding protein beta 1
Regulatory gene	CSS0000128.g tesmin tso1-like cxc CSS0000333.g Homeobox-leucine zipper protein CSS0001102.g homeobox-leucine zipper protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0001101	response to acid chemical	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004620	phospholipase activity	MF
GO:0004630	phospholipase D activity	MF
GO:0005096	GTPase activator activity	MF
GO:0005488	binding	MF
GO:0005543	phospholipid binding	MF
GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0005773	vacuole	CC
GO:0005783	endoplasmic reticulum	CC
GO:0005829	cytosol	CC
GO:0005886	plasma membrane	CC
GO:0005911	cell-cell junction	CC
GO:0006082	organic acid metabolic process	BP
GO:0006629	lipid metabolic process	BP
GO:0006631	fatty acid metabolic process	BP
GO:0007154	cell communication	BP
GO:0007165	signal transduction	BP
GO:0007275	multicellular organism development	BP
GO:0008047	enzyme activator activity	MF
GO:0008081	phosphoric diester hydrolase activity	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008289	lipid binding	MF
GO:0009506	plasmodesma	CC
GO:0009507	chloroplast	CC
GO:0009526	plastid envelope	CC
GO:0009536	plastid	CC
GO:0009653	anatomical structure morphogenesis	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009737	response to abscisic acid	BP
GO:0009738	abscisic acid-activated signaling pathway	BP
GO:0009755	hormone-mediated signaling pathway	BP
GO:0009787	regulation of abscisic acid-activated signaling pathway	BP
GO:0009789	positive regulation of abscisic acid-activated signaling pathway	BP
GO:0009791	post-embryonic development	BP
GO:0009845	seed germination	BP
GO:0009941	chloroplast envelope	CC
GO:0009965	leaf morphogenesis	BP
GO:0009966	regulation of signal transduction	BP
GO:0009967	positive regulation of signal transduction	BP
GO:0009987	cellular process	BP
GO:0010016	shoot system morphogenesis	BP
GO:0010033	response to organic substance	BP
GO:0010035	response to inorganic substance	BP
GO:0010038	response to metal ion	BP
GO:0010119	regulation of stomatal movement	BP
GO:0010358	leaf shaping	BP
GO:0010646	regulation of cell communication	BP
GO:0010647	positive regulation of cell communication	BP
GO:0012505	endomembrane system	CC
GO:0016020	membrane	CC
GO:0016298	lipase activity	MF
GO:0016787	hydrolase activity	MF
GO:0016788	hydrolase activity, acting on ester bonds	MF
GO:0019752	carboxylic acid metabolic process	BP
GO:0023051	regulation of signaling	BP
GO:0023052	signaling	BP
GO:0023056	positive regulation of signaling	BP
GO:0030054	cell junction	CC
GO:0030135	coated vesicle	CC
GO:0030136	clathrin-coated vesicle	CC
GO:0030234	enzyme regulator activity	MF
GO:0030695	GTPase regulator activity	MF
GO:0031410	cytoplasmic vesicle	CC
GO:0031967	organelle envelope	CC
GO:0031975	envelope	CC
GO:0031982	vesicle	CC
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0032870	cellular response to hormone stimulus	BP
GO:0033993	response to lipid	BP
GO:0035091	phosphatidylinositol binding	MF
GO:0042221	response to chemical	BP
GO:0042578	phosphoric ester hydrolase activity	MF
GO:0043085	positive regulation of catalytic activity	BP
GO:0043087	regulation of GTPase activity	BP
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0043547	positive regulation of GTPase activity	BP
GO:0044093	positive regulation of molecular function	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0046686	response to cadmium ion	BP
GO:0048366	leaf development	BP
GO:0048367	shoot system development	BP
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0048532	anatomical structure arrangement	BP
GO:0048583	regulation of response to stimulus	BP
GO:0048584	positive regulation of response to stimulus	BP
GO:0048731	system development	BP
GO:0048827	phyllome development	BP
GO:0048856	anatomical structure development	BP
GO:0050789	regulation of biological process	BP
GO:0050790	regulation of catalytic activity	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051336	regulation of hydrolase activity	BP
GO:0051345	positive regulation of hydrolase activity	BP
GO:0051716	cellular response to stimulus	BP
GO:0055044	symplast	CC
GO:0060589	nucleoside-triphosphatase regulator activity	MF
GO:0065007	biological regulation	BP
GO:0065009	regulation of molecular function	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071215	cellular response to abscisic acid stimulus	BP
GO:0071229	cellular response to acid chemical	BP
GO:0071310	cellular response to organic substance	BP
GO:0071396	cellular response to lipid	BP
GO:0071495	cellular response to endogenous stimulus	BP
GO:0071704	organic substance metabolic process	BP
GO:0071944	cell periphery	CC
GO:0090351	seedling development	BP
GO:0097305	response to alcohol	BP
GO:0097306	cellular response to alcohol	BP
GO:0097708	intracellular vesicle	CC
GO:0098772	molecular function regulator activity	MF
GO:0099402	plant organ development	BP
GO:1901419	regulation of response to alcohol	BP
GO:1901421	positive regulation of response to alcohol	BP
GO:1901700	response to oxygen-containing compound	BP
GO:1901701	cellular response to oxygen-containing compound	BP
GO:1901981	phosphatidylinositol phosphate binding	MF
GO:1902936	phosphatidylinositol bisphosphate binding	MF
GO:1905392	plant organ morphogenesis	BP
GO:1905957	regulation of cellular response to alcohol	BP
GO:1905959	positive regulation of cellular response to alcohol	BP

KEGG Term	Name	Description
map04144	Endocytosis	Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00565	Ether lipid metabolism	-
map00564	Glycerophospholipid metabolism	-