Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
geneMaker00029273
View in Genome Browser
Position
GWHBGXC00000002:10175082-10182335 (-)
7253bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ MBSQ MT family
Organism
Cinnamomum camphora
Also AS AT3G63410

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00029296 GDP-mannose 3;5-epimerase
geneMaker00029477 -
geneMaker00029412 Omega-6 fatty acid desaturase
Regulatory gene
geneMaker00000164 MADS-box transcription factor
geneMaker00000453 NAC domain-containing protein 21
geneMaker00000590 Transcription factor JUNGBRUNNEN 1-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006732 obsolete coenzyme metabolic process BP
GO:0006766 vitamin metabolic process BP
GO:0006775 fat-soluble vitamin metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008168 methyltransferase activity MF
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity MF
GO:0009058 biosynthetic process BP
GO:0009108 obsolete coenzyme biosynthetic process BP
GO:0009110 vitamin biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009528 plastid inner membrane CC
GO:0009536 plastid CC
GO:0009706 chloroplast inner membrane CC
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0010189 vitamin E biosynthetic process BP
GO:0010236 plastoquinone biosynthetic process BP
GO:0016020 membrane CC
GO:0016740 transferase activity MF
GO:0016741 transferase activity, transferring one-carbon groups MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019866 organelle inner membrane CC
GO:0031090 organelle membrane CC
GO:0031967 organelle envelope CC
GO:0031969 chloroplast membrane CC
GO:0031975 envelope CC
GO:0032259 methylation BP
GO:0042170 plastid membrane CC
GO:0042180 cellular ketone metabolic process BP
GO:0042181 ketone biosynthetic process BP
GO:0042360 vitamin E metabolic process BP
GO:0042362 fat-soluble vitamin biosynthetic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051188 obsolete cofactor biosynthetic process BP
GO:0051741 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity MF
GO:0071704 organic substance metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901615 organic hydroxy compound metabolic process BP
GO:1901617 organic hydroxy compound biosynthetic process BP
GO:1901661 quinone metabolic process BP
GO:1901663 quinone biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00130 Ubiquinone and other terpenoid-quinone biosynthesis Ubiquinone (UQ), also called coenzyme Q, and plastoquinone (PQ) are electron carriers in oxidative phosphorylation and photosynthesis, respectively. The quinoid nucleus of ubiquinone is derived from the shikimate pathway; 4-hydroxybenzoate is directly formed from chorismate in bacteria, while it can be formed from either chorismate or tyrosine in yeast. The following biosynthesis of terpenoid moiety involves reactions of prenylation, decarboxylation, and three hydroxylations alternating with three methylations. The order of these reactions are somewhat different between bacteria and yeast. Phylloquinone (vitamin K1), menaquinone (vitamin K2), and tocopherol (vitamin E) are fat-soluble vitamins. Phylloquinone is a compound present in all photosynthetic plants serving as a cofactor for photosystem I-mediated electron transport. Menaquinone is an obligatory component of the electron-transfer pathway in bacteria.