PPGR - Gene Detail

Basic Information

Gene ID	geneMaker00029412 View in Genome Browser
Position	GWHBGXC00000008:8765806-8793587 (-) 27781bp
Gene Type	gene
Gene Description (Protein Product)	Omega-6 fatty acid desaturase
Organism	Cinnamomum camphora
Also AS	AT4G30950

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

geneMaker00029412 Omega-6 fatty acid desaturase

geneMaker00029559 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family

geneMaker00029737 Alpha/beta hydrolase family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006082	organic acid metabolic process	BP
GO:0006629	lipid metabolic process	BP
GO:0006631	fatty acid metabolic process	BP
GO:0006633	fatty acid biosynthetic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008610	lipid biosynthetic process	BP
GO:0009058	biosynthetic process	BP
GO:0009314	response to radiation	BP
GO:0009416	response to light stimulus	BP
GO:0009507	chloroplast	CC
GO:0009526	plastid envelope	CC
GO:0009536	plastid	CC
GO:0009628	response to abiotic stimulus	BP
GO:0009642	response to light intensity	BP
GO:0009644	response to high light intensity	BP
GO:0009892	negative regulation of metabolic process	BP
GO:0009941	chloroplast envelope	CC
GO:0009987	cellular process	BP
GO:0010109	regulation of photosynthesis	BP
GO:0010205	photoinhibition	BP
GO:0016053	organic acid biosynthetic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0019904	protein domain specific binding	MF
GO:0031323	regulation of cellular metabolic process	BP
GO:0031324	negative regulation of cellular metabolic process	BP
GO:0031967	organelle envelope	CC
GO:0031975	envelope	CC
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0042548	regulation of photosynthesis, light reaction	BP
GO:0043155	negative regulation of photosynthesis, light reaction	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0043467	regulation of generation of precursor metabolites and energy	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0046394	carboxylic acid biosynthetic process	BP
GO:0048519	negative regulation of biological process	BP
GO:0048523	negative regulation of cellular process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0065007	biological regulation	BP
GO:0071704	organic substance metabolic process	BP
GO:0072330	monocarboxylic acid biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1905156	negative regulation of photosynthesis	BP