Basic Information
Gene ID
Ciclev10016087m.g.v1.0
Position
scaffold_2:13799456-13802309 (-)
2853bp
Gene Type
gene
Gene Description (Protein Product)
pre-mRNA-splicing factor ISY1
Organism
Also AS AT3G18790CICLE_v10016087mg

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ciclev10024683m.g.v1.0 pre-mRNA-processing-splicing factor
Ciclev10018691m.g.v1.0 Cell division cycle
Ciclev10027494m.g.v1.0 spliceosomal snRNP assembly
Regulatory gene
Ciclev10000850m.g.v1.0 Protein SENSITIVE TO PROTON RHIZOTOXICITY
Ciclev10000982m.g.v1.0 zinc finger protein
Ciclev10001017m.g.v1.0 Zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.