Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
orange1.1g027380m.g.v1.1
View in Genome Browser
Position
scaffold00002:2732718-2736161 (-)
3443bp
Gene Type
gene
Gene Description (Protein Product)
Sin3 binding region of histone deacetylase complex subunit SAP30
Organism
Citrus sinensis
Also AS AT1G19330CICLE_v10002391mg

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g031615m.g.v1.1 Histone deacetylase complex subunit
orange1.1g047608m.g.v1.1 Belongs to the histone deacetylase family. HD Type 1 subfamily
orange1.1g035470m.g.v1.1 Truncated transcription factor CAULIFLOWER
Regulatory gene
orange1.1g000304m.g.v1.1 SANT SWI3; ADA2; N-CoR and TFIIIB'' DNA-binding domains
orange1.1g001409m.g.v1.1 Myb-like protein L
orange1.1g001969m.g.v1.1 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)