Basic Information
Gene ID
orange1.1g045065m.g.v1.1
Position
scaffold00088:85777-87114 (-)
1337bp
Gene Type
gene
Gene Description (Protein Product)
ENTH domain
Organism
Also AS AT3G23350CICLE_v10006622mg

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g047304m.g.v1.1 Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family
orange1.1g047538m.g.v1.1 Adaptin ear-binding coat-associated protein
Regulatory gene
orange1.1g001099m.g.v1.1 Protein ALWAYS EARLY
orange1.1g002213m.g.v1.1 Tesmin/TSO1-like CXC domain
orange1.1g002869m.g.v1.1 homeobox-leucine zipper protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.