Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g046086m.g.v1.1
View in Genome Browser
Position
scaffold00478:74325-78530 (-)
4205bp
Gene Type
gene
Gene Description (Protein Product)
mitochondrial fission
Organism
Citrus sinensis
Also AS AT5G17680CICLE_v10023641mg

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g048059m.g.v1.1 Ras-related protein
orange1.1g048398m.g.v1.1 endocytosis
orange1.1g047538m.g.v1.1 Adaptin ear-binding coat-associated protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000266 mitochondrial fission BP
GO:0000278 mitotic cell cycle BP
GO:0000281 mitotic cytokinesis BP
GO:0000910 cytokinesis BP
GO:0000920 septum digestion after cytokinesis BP
GO:0003373 dynamin family protein polymerization involved in membrane fission BP
GO:0003374 dynamin family protein polymerization involved in mitochondrial fission BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003924 GTPase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005740 mitochondrial envelope CC
GO:0005886 plasma membrane CC
GO:0006996 organelle organization BP
GO:0006997 nucleus organization BP
GO:0007005 mitochondrion organization BP
GO:0007049 cell cycle BP
GO:0008017 microtubule binding MF
GO:0008064 regulation of actin polymerization or depolymerization BP
GO:0008092 cytoskeletal protein binding MF
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0010639 negative regulation of organelle organization BP
GO:0015631 tubulin binding MF
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0022402 cell cycle process BP
GO:0022607 cellular component assembly BP
GO:0030832 regulation of actin filament length BP
GO:0030834 regulation of actin filament depolymerization BP
GO:0030835 negative regulation of actin filament depolymerization BP
GO:0031090 organelle membrane CC
GO:0031966 mitochondrial membrane CC
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0032153 cell division site CC
GO:0032154 cleavage furrow CC
GO:0032155 obsolete cell division site part CC
GO:0032535 regulation of cellular component size BP
GO:0032956 regulation of actin cytoskeleton organization BP
GO:0032970 regulation of actin filament-based process BP
GO:0033043 regulation of organelle organization BP
GO:0034622 protein-containing complex assembly BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043242 negative regulation of protein-containing complex disassembly BP
GO:0043244 regulation of protein-containing complex disassembly BP
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0048285 organelle fission BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051128 regulation of cellular component organization BP
GO:0051129 negative regulation of cellular component organization BP
GO:0051258 protein polymerization BP
GO:0051301 cell division BP
GO:0051493 regulation of cytoskeleton organization BP
GO:0051494 negative regulation of cytoskeleton organization BP
GO:0061024 membrane organization BP
GO:0061025 membrane fusion BP
GO:0061640 cytoskeleton-dependent cytokinesis BP
GO:0065003 protein-containing complex assembly BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0090066 regulation of anatomical structure size BP
GO:0090148 membrane fission BP
GO:0098590 plasma membrane region CC
GO:0110053 regulation of actin filament organization BP
GO:1901879 regulation of protein depolymerization BP
GO:1901880 negative regulation of protein depolymerization BP
GO:1902903 regulation of supramolecular fiber organization BP
GO:1902904 negative regulation of supramolecular fiber organization BP
GO:1903047 mitotic cell cycle process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00620 Pyruvate metabolism -
map00020 Citrate cycle (TCA cycle) The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].