Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g047406m.g.v1.1
View in Genome Browser
Position
scaffold00027:250055-253113 (-)
3058bp
Gene Type
gene
Gene Description (Protein Product)
RNA methyltransferase
Organism
Citrus sinensis
Also AS AT5G51130CICLE_v100092682mg

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g047508m.g.v1.1 U4 U6 small nuclear ribonucleoprotein
orange1.1g047513m.g.v1.1 MKI67 FHA domain-interacting nucleolar phosphoprotein-like
orange1.1g047961m.g.v1.1 Belongs to the class I-like SAM-binding methyltransferase superfamily
Regulatory gene
orange1.1g001099m.g.v1.1 Protein ALWAYS EARLY
orange1.1g002213m.g.v1.1 Tesmin/TSO1-like CXC domain
orange1.1g003750m.g.v1.1 PHD zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001510 RNA methylation BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008168 methyltransferase activity MF
GO:0008173 RNA methyltransferase activity MF
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity MF
GO:0009451 RNA modification BP
GO:0009987 cellular process BP
GO:0016070 RNA metabolic process BP
GO:0016073 snRNA metabolic process BP
GO:0016740 transferase activity MF
GO:0016741 transferase activity, transferring one-carbon groups MF
GO:0032259 methylation BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034660 ncRNA metabolic process BP
GO:0040031 snRNA modification BP
GO:0043170 macromolecule metabolic process BP
GO:0043412 macromolecule modification BP
GO:0043414 macromolecule methylation BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:0140098 catalytic activity, acting on RNA MF
GO:1901360 organic cyclic compound metabolic process BP