Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
EUGRSUZ_I00032
View in Genome Browser
Position
KK198761:497494-503845 (-)
6351bp
Gene Type
gene
Gene Description (Protein Product)
CCR4-NOT transcription complex subunit
Organism
Eucalyptus grandis
Also AS Eucgr.I00032AT5G18420

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
EUGRSUZ_J02100 NOT transcription complex subunit VIP2
EUGRSUZ_J00304 Nuclear pore complex protein
EUGRSUZ_I01920 Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II
Regulatory gene
EUGRSUZ_A00040 transcription, DNA-templated
EUGRSUZ_A00102 Transcription factor
EUGRSUZ_A00553 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)