PPGR - Gene Detail

Gene ID	FSB0125991 View in Genome Browser
Position	scaffold2660_size57589:46921-56681 (-) 9760bp
Gene Type	gene
Gene Description (Protein Product)	Protein BASIC PENTACYSTEINE4-like
Organism	Fagus sylvatica
Also AS	AT2G21240

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	FSB0125991 Protein BASIC PENTACYSTEINE4-like FSB0129508 GAGA binding protein-like family FSB0129638 Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand
Regulatory gene	FSB0100008 NAC domain-containing protein FSB0100026 (NAC) domain-containing protein FSB0100191 NAC domain-containing protein
Target gene	FSB0100006 Encoded by FSB0100007 FSB0100008 NAC domain-containing protein

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0008150	biological_process	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009723	response to ethylene	BP
GO:0009725	response to hormone	BP
GO:0010033	response to organic substance	BP
GO:0042221	response to chemical	BP
GO:0042802	identical protein binding	MF
GO:0042803	protein homodimerization activity	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043565	sequence-specific DNA binding	MF
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0046983	protein dimerization activity	MF
GO:0050789	regulation of biological process	BP
GO:0050793	regulation of developmental process	BP
GO:0050896	response to stimulus	BP
GO:0065007	biological regulation	BP
GO:0097159	organic cyclic compound binding	MF
GO:1901363	heterocyclic compound binding	MF