Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000155450
View in Genome Browser
Position
Contig2883:117089-124305 (-)
7216bp
Gene Type
gene
Gene Description (Protein Product)
Sec8 exocyst complex component specific domain
Organism
Fraxinus excelsior
Also AS AT3G10380

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000349210 exocyst complex component
FRAEX38873_v2_000386420 trafficking protein particle complex
FRAEX38873_v2_000177900 Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit
Regulatory gene
FRAEX38873_v2_000001190 Stress-associated protein
FRAEX38873_v2_000003330 Transcription factor DIVARICATA-like
FRAEX38873_v2_000005000 Myb-related protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000145 exocyst CC
GO:0003006 developmental process involved in reproduction BP
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005615 extracellular space CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0005938 cell cortex CC
GO:0006605 protein targeting BP
GO:0006612 protein targeting to membrane BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006887 exocytosis BP
GO:0006892 post-Golgi vesicle-mediated transport BP
GO:0006893 Golgi to plasma membrane transport BP
GO:0006903 vesicle targeting BP
GO:0007154 cell communication BP
GO:0007275 multicellular organism development BP
GO:0008037 cell recognition BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009506 plasmodesma CC
GO:0009791 post-embryonic development BP
GO:0009856 pollination BP
GO:0009875 pollen-pistil interaction BP
GO:0009987 cellular process BP
GO:0010154 fruit development BP
GO:0010191 mucilage metabolic process BP
GO:0010192 mucilage biosynthetic process BP
GO:0010214 seed coat development BP
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016192 vesicle-mediated transport BP
GO:0022414 reproductive process BP
GO:0030054 cell junction CC
GO:0031982 vesicle CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032940 secretion by cell BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0034613 protein localization BP
GO:0042886 amide transport BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043230 extracellular organelle CC
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044421 obsolete extracellular region part CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044448 obsolete cell cortex part CC
GO:0044464 obsolete cell part CC
GO:0044706 multi-multicellular organism process BP
GO:0045184 establishment of protein localization BP
GO:0046903 secretion BP
GO:0046907 intracellular transport BP
GO:0048193 Golgi vesicle transport BP
GO:0048316 seed development BP
GO:0048354 mucilage biosynthetic process involved in seed coat development BP
GO:0048359 mucilage metabolic process involved in seed coat development BP
GO:0048544 recognition of pollen BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051648 vesicle localization BP
GO:0051649 establishment of localization in cell BP
GO:0051650 establishment of vesicle localization BP
GO:0051656 establishment of organelle localization BP
GO:0051704 obsolete multi-organism process BP
GO:0055044 symplast CC
GO:0060321 acceptance of pollen BP
GO:0061458 reproductive system development BP
GO:0070062 extracellular exosome CC
GO:0070727 cellular macromolecule localization BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071944 cell periphery CC
GO:0072657 protein localization to membrane BP
GO:0090150 establishment of protein localization to membrane BP
GO:0098876 vesicle-mediated transport to the plasma membrane BP
GO:0099023 vesicle tethering complex CC
GO:0099568 cytoplasmic region CC
GO:1903561 extracellular vesicle CC