Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000248870
View in Genome Browser
Position
Contig474:136116-141345 (+)
5229bp
Gene Type
gene
Gene Description (Protein Product)
Pullulanase 1
Organism
Fraxinus excelsior
Also AS AT5G04360

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000277200 Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
FRAEX38873_v2_000272640 4-alpha-glucanotransferase
FRAEX38873_v2_000312930 Starch synthase
Regulatory gene
FRAEX38873_v2_000002120 B3 DNA binding domain
FRAEX38873_v2_000006340 Transcription factor
FRAEX38873_v2_000006700 MYB-CC type transfactor, LHEQLE motif

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000271 polysaccharide biosynthetic process BP
GO:0000272 polysaccharide catabolic process BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005975 carbohydrate metabolic process BP
GO:0005976 polysaccharide metabolic process BP
GO:0005982 starch metabolic process BP
GO:0005983 starch catabolic process BP
GO:0006073 cellular glucan metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009250 glucan biosynthetic process BP
GO:0009251 glucan catabolic process BP
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009987 cellular process BP
GO:0010303 limit dextrinase activity MF
GO:0016051 carbohydrate biosynthetic process BP
GO:0016052 carbohydrate catabolic process BP
GO:0016787 hydrolase activity MF
GO:0016798 hydrolase activity, acting on glycosyl bonds MF
GO:0019252 starch biosynthetic process BP
GO:0033692 cellular polysaccharide biosynthetic process BP
GO:0034637 cellular carbohydrate biosynthetic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044042 glucan metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044247 cellular polysaccharide catabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044262 cellular carbohydrate metabolic process BP
GO:0044264 cellular polysaccharide metabolic process BP
GO:0044275 cellular carbohydrate catabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0051060 pullulanase activity MF
GO:0071704 organic substance metabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1901576 organic substance biosynthetic process BP