Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ginchr1.1040
View in Genome Browser
Position
GWHBAVD00000001:362190573-362205471 (+)
14898bp
Gene Type
gene
Gene Description (Protein Product)
zinc finger CCCH domain-containing protein
Organism
Ginkgo biloba
Also AS AT2G02160evm.TU.chr1.1040

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ginchr2.2119 transcription factor
Ginchr10.1747 transcription factor
Ginchr1.1836 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Regulatory gene
Ginchr1.2482 Cyclic dof factor
Ginchr1.83 tesmin TSO1-like CXC
Ginchr10.1672 dof zinc finger protein
Target gene
Ginchr1.1010 Upstream activation factor subunit
Ginchr1.116
Ginchr1.1205 chaperone protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003729 mRNA binding MF
GO:0005488 binding MF
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF