Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ginchr4.555
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Position
GWHBAVD00000006:139013606-139015054 (-)
1448bp
Gene Type
gene
Gene Description (Protein Product)
"Removal of H(2)O(2)
Organism
Ginkgo biloba
Also AS AT1G05260evm.TU.chr4.555

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ginctg37259.1 Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family
Ginchr5.747 Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family
Ginchr7.385 Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family
Regulatory gene
Ginchr1.1560 Protein BASIC PENTACYSTEINE6-like
Ginchr1.176 Transcription factor
Ginchr1.2192 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00940 Phenylpropanoid biosynthesis Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.