Basic Information
Gene ID
Position
GWHBAVD00000006:170350503-170353427 (+)
2924bp
Gene Type
gene
Gene Description (Protein Product)
Photosystem II reaction center psb28 protein
Organism
Also AS AT4G28660evm.TU.chr4.600

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ginchr9.1844 oxygen-evolving enhancer protein
Ginchr5.278 oxygen-evolving enhancer protein
Ginchr6.1459 psbP-like protein 1
Regulatory gene
Ginchr1.1011 transcription factor
Ginchr1.1198 Zinc finger protein
Ginchr1.158 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00195 Photosynthesis Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.