PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Lchi18565.g View in Genome Browser
Position	Scaffold189:2621941-2625914 (-) 3973bp
Gene Type	gene
Gene Description (Protein Product)	The H protein shuttles the methylamine group of glycine from the P protein to the T protein
Organism	Liriodendron chinense
Also AS	AT2G35120

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Lchi23297.g Interconversion of serine and glycine Lchi28846.g Interconversion of serine and glycine Lchi29830.g Serine--glyoxylate
Regulatory gene	Lchi01587.g MADS-box transcription factor Lchi01744.g Floral homeotic protein Lchi02285.g MADS-box protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00630	Glyoxylate and dicarboxylate metabolism	-
map00260	Glycine, serine and threonine metabolism	Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].