Basic Information
Gene ID
Position
Scaffold3325:491820-515441 (-)
23621bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Organism
Also AS AT5G46180

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi31201.g Belongs to the Orn Lys Arg decarboxylase class-II family
Lchi34162.g Belongs to the Orn Lys Arg decarboxylase class-II family
Lchi32599.g P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants
Regulatory gene
Lchi01587.g MADS-box transcription factor
Lchi01744.g Floral homeotic protein
Lchi02285.g MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0006979 response to oxidative stress BP
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0009266 response to temperature stimulus BP
GO:0009408 response to heat BP
GO:0009413 response to flooding BP
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009733 response to auxin BP
GO:0009737 response to abscisic acid BP
GO:0009741 response to brassinosteroid BP
GO:0009753 response to jasmonic acid BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0014070 response to organic cyclic compound BP
GO:0019842 vitamin binding MF
GO:0030170 pyridoxal phosphate binding MF
GO:0033993 response to lipid BP
GO:0036094 small molecule binding MF
GO:0042221 response to chemical BP
GO:0042802 identical protein binding MF
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0048037 obsolete cofactor binding MF
GO:0050662 obsolete coenzyme binding MF
GO:0050896 response to stimulus BP
GO:0070279 vitamin B6 binding MF
GO:0097159 organic cyclic compound binding MF
GO:0097305 response to alcohol BP
GO:1901363 heterocyclic compound binding MF
GO:1901700 response to oxygen-containing compound BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00330 Arginine and proline metabolism -