Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
MD00G1022000.v1.1
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Position
Chr00:3800996-3802245 (-)
1249bp
Gene Type
gene
Gene Description (Protein Product)
B3 domain-containing
Organism
Malus domestica
Also AS MD00G1022000AT3G18990

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
MD00G1020600.v1.1 B3 domain-containing
MD00G1022000.v1.1 B3 domain-containing
MD00G1022100.v1.1 B3 domain-containing
Target gene
MD00G1000200.v1.1 Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
MD00G1001500.v1.1 Putative S-adenosyl-L-methionine-dependent methyltransferase
MD00G1001700.v1.1 Component of the replication protein A complex (RPA) required for DNA recombination; repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0006950 response to stress BP
GO:0008150 biological_process BP
GO:0009266 response to temperature stimulus BP
GO:0009409 response to cold BP
GO:0009628 response to abiotic stimulus BP
GO:0009909 regulation of flower development BP
GO:0010048 vernalization response BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043565 sequence-specific DNA binding MF
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048580 regulation of post-embryonic development BP
GO:0048831 regulation of shoot system development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050896 response to stimulus BP
GO:0051239 regulation of multicellular organismal process BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF
GO:2000026 regulation of multicellular organismal development BP
GO:2000241 regulation of reproductive process BP