PPGR - Gene Detail

Basic Information

Gene ID	MD15G1013600.v1.1 View in Genome Browser
Position	Chr15:743910-745859 (+) 1949bp
Gene Type	gene
Gene Description (Protein Product)	diphthine synthase
Organism	Malus domestica
Also AS	MD15G1013600AT4G31790

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

MD15G1418800.v1.1 Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0; it binds pre-60S subunits at an early stage of assembly in the nucleolus; and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes

MD17G1218500.v1.1 60S ribosome subunit biogenesis protein NIP7 homolog

MD16G1242600.v1.1 Ribosomal RNA processing protein 1 homolog

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004164	diphthine synthase activity	MF
GO:0006417	regulation of translation	BP
GO:0006448	regulation of translational elongation	BP
GO:0006464	protein modification process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008168	methyltransferase activity	MF
GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	MF
GO:0009058	biosynthetic process	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0010608	post-transcriptional regulation of gene expression	BP
GO:0016740	transferase activity	MF
GO:0016741	transferase activity, transferring one-carbon groups	MF
GO:0017182	peptidyl-diphthamide metabolic process	BP
GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine	BP
GO:0018193	peptidyl-amino acid modification	BP
GO:0018202	peptidyl-histidine modification	BP
GO:0019222	regulation of metabolic process	BP
GO:0019538	protein metabolic process	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0032259	methylation	BP
GO:0032268	regulation of protein metabolic process	BP
GO:0034248	regulation of amide metabolic process	BP
GO:0036211	protein modification process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043412	macromolecule modification	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051246	regulation of protein metabolic process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0071704	organic substance metabolic process	BP
GO:0080090	regulation of primary metabolic process	BP
GO:1900247	regulation of cytoplasmic translational elongation	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2000765	regulation of cytoplasmic translation	BP