PPGR - Gene Detail

Basic Information

Gene ID	MD17G1017500.v1.1 View in Genome Browser
Position	Chr17:1383780-1386230 (-) 2450bp
Gene Type	gene
Gene Description (Protein Product)	Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. Functions as Fe-S scaffold; mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. Essential for embryo development
Organism	Malus domestica
Also AS	MD17G1017500AT5G50960

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

MD17G1017500.v1.1 Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. Functions as Fe-S scaffold; mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. Essential for embryo development

MD17G1046800.v1.1 Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH ubiquinone oxidoreductase complex (complex I)

MD17G1215900.v1.1 NADH dehydrogenase ubiquinone flavoprotein 2

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0042802	identical protein binding	MF
GO:0042803	protein homodimerization activity	MF
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046983	protein dimerization activity	MF
GO:0048037	obsolete cofactor binding	MF
GO:0051536	iron-sulfur cluster binding	MF
GO:0051540	metal cluster binding	MF