Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene01774
View in Genome Browser
Position
hic_scaffold_23:10967228-10969150 (-)
1922bp
Gene Type
gene
Gene Description (Protein Product)
K-box region
Organism
Phyllostachys edulis
Also AS AT5G23260

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene27386 ALG3 protein
PH02Gene27381 Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
PH02Gene10647 Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Regulatory gene
PH02Gene00185 GAGA binding protein-like family
PH02Gene00888 domain associated with HOX domains
PH02Gene00891 regulation of nucleic acid-templated transcription
Target gene
PH02Gene00002
PH02Gene00003 Homeobox KN domain
PH02Gene00007 Protein kinase domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0001558 regulation of cell growth BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0006355 regulation of DNA-templated transcription BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008360 regulation of cell shape BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009791 post-embryonic development BP
GO:0009888 tissue development BP
GO:0009889 regulation of biosynthetic process BP
GO:0009908 flower development BP
GO:0010154 fruit development BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0022414 reproductive process BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0022604 regulation of cell morphogenesis BP
GO:0030308 negative regulation of cell growth BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0035670 plant-type ovary development BP
GO:0040008 regulation of growth BP
GO:0040034 regulation of development, heterochronic BP
GO:0043455 regulation of secondary metabolic process BP
GO:0043900 obsolete regulation of multi-organism process BP
GO:0045595 regulation of cell differentiation BP
GO:0045926 negative regulation of growth BP
GO:0048316 seed development BP
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048438 floral whorl development BP
GO:0048440 carpel development BP
GO:0048467 gynoecium development BP
GO:0048481 plant ovule development BP
GO:0048506 regulation of timing of meristematic phase transition BP
GO:0048509 regulation of meristem development BP
GO:0048510 regulation of timing of transition from vegetative to reproductive phase BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048530 fruit morphogenesis BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0051128 regulation of cellular component organization BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051302 regulation of cell division BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0080060 integument development BP
GO:0080090 regulation of primary metabolic process BP
GO:0080154 regulation of fertilization BP
GO:0080155 regulation of double fertilization forming a zygote and endosperm BP
GO:0090567 reproductive shoot system development BP
GO:0090698 post-embryonic plant morphogenesis BP
GO:0099402 plant organ development BP
GO:0140110 transcription regulator activity MF
GO:1900376 regulation of secondary metabolite biosynthetic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000029 regulation of proanthocyanidin biosynthetic process BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000241 regulation of reproductive process BP
GO:2000762 regulation of phenylpropanoid metabolic process BP
GO:2001141 regulation of RNA biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00630 Glyoxylate and dicarboxylate metabolism -
map00260 Glycine, serine and threonine metabolism Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].