Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene04616
View in Genome Browser
Position
hic_scaffold_18:32122440-32128592 (+)
6152bp
Gene Type
gene
Gene Description (Protein Product)
SBP domain
Organism
Phyllostachys edulis
Also AS AT2G42200

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene07879 MADS-box transcription factor
PH02Gene05347 LSD1 zinc finger
PH02Gene36292 DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Regulatory gene
PH02Gene00185 GAGA binding protein-like family
PH02Gene13029 GAGA binding protein-like family
PH02Gene14474 GAGA binding protein-like family
Target gene
PH02Gene00022 U2 small nuclear ribonucleoprotein B''
PH02Gene00124 -
PH02Gene00138 Peptidase M50B-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0006355 regulation of DNA-templated transcription BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008361 regulation of cell size BP
GO:0009791 post-embryonic development BP
GO:0009889 regulation of biosynthetic process BP
GO:0009908 flower development BP
GO:0009987 cellular process BP
GO:0010228 vegetative to reproductive phase transition of meristem BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0016043 cellular component organization BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0022414 reproductive process BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032535 regulation of cellular component size BP
GO:0042127 regulation of cell population proliferation BP
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048438 floral whorl development BP
GO:0048443 stamen development BP
GO:0048466 androecium development BP
GO:0048608 reproductive structure development BP
GO:0048653 anther development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048831 regulation of shoot system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0090066 regulation of anatomical structure size BP
GO:0090567 reproductive shoot system development BP
GO:0099402 plant organ development BP
GO:0140110 transcription regulator activity MF
GO:1900618 regulation of shoot system morphogenesis BP
GO:1901371 regulation of leaf morphogenesis BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1905421 regulation of plant organ morphogenesis BP
GO:1905428 regulation of plant organ formation BP
GO:2000024 regulation of leaf development BP
GO:2000025 regulation of leaf formation BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP