Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene08910
View in Genome Browser
Position
hic_scaffold_21:1256585-1259188 (+)
2603bp
Gene Type
gene
Gene Description (Protein Product)
p21-C-terminal region-binding protein
Organism
Phyllostachys edulis
Also AS AT2G44510

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene17644 Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly
PH02Gene26738 DEAD-box ATP-dependent RNA helicase 16
PH02Gene35685 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Regulatory gene
PH02Gene00185 GAGA binding protein-like family
PH02Gene00888 domain associated with HOX domains
PH02Gene00891 regulation of nucleic acid-templated transcription

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005730 nucleolus CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0070013 intracellular organelle lumen CC