Basic Information
Gene ID
Position
hic_scaffold_13:115935931-115939655 (-)
3724bp
Gene Type
gene
Gene Description (Protein Product)
Pectinesterase
Organism
Also AS AT3G29090

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene44809 Pectate lyase
PH02Gene23810 Amb_all
PH02Gene43221 Glycosyl hydrolases family 28
Regulatory gene
PH02Gene00185 GAGA binding protein-like family
PH02Gene00304 Dof domain, zinc finger
PH02Gene00452 DNA-binding domain in plant proteins such as APETALA2 and EREBPs

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005975 carbohydrate metabolic process BP
GO:0005976 polysaccharide metabolic process BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009987 cellular process BP
GO:0010393 galacturonan metabolic process BP
GO:0016787 hydrolase activity MF
GO:0016788 hydrolase activity, acting on ester bonds MF
GO:0017144 xenobiotic metabolic process BP
GO:0030599 pectinesterase activity MF
GO:0042742 defense response to bacterium BP
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0045488 pectin metabolic process BP
GO:0050829 defense response to Gram-negative bacterium BP
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0052689 carboxylic ester hydrolase activity MF
GO:0071704 organic substance metabolic process BP
GO:0098542 defense response to other organism BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -