Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene28637
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Position
hic_scaffold_16:26696064-26697638 (-)
1574bp
Gene Type
gene
Gene Description (Protein Product)
DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Organism
Phyllostachys edulis
Also AS AT1G28360

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene32328 KH domain
PH02Gene47379 Zinc finger, C3HC4 type (RING finger)
PH02Gene32317 Zinc finger, C3HC4 type (RING finger)
Regulatory gene
PH02Gene00185 GAGA binding protein-like family
PH02Gene13029 GAGA binding protein-like family
PH02Gene14474 GAGA binding protein-like family
Target gene
PH02Gene00002
PH02Gene00003 Homeobox KN domain
PH02Gene00004 Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000160 phosphorelay signal transduction system BP
GO:0003674 molecular_function MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0006355 regulation of DNA-templated transcription BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0008150 biological_process BP
GO:0009719 response to endogenous stimulus BP
GO:0009723 response to ethylene BP
GO:0009725 response to hormone BP
GO:0009755 hormone-mediated signaling pathway BP
GO:0009873 ethylene-activated signaling pathway BP
GO:0009889 regulation of biosynthetic process BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0023052 signaling BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032870 cellular response to hormone stimulus BP
GO:0035556 intracellular signal transduction BP
GO:0042221 response to chemical BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051716 cellular response to stimulus BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071310 cellular response to organic substance BP
GO:0071369 cellular response to ethylene stimulus BP
GO:0071495 cellular response to endogenous stimulus BP
GO:0080090 regulation of primary metabolic process BP
GO:0140110 transcription regulator activity MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP