Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene29362
View in Genome Browser
Position
hic_scaffold_23:43484892-43496650 (+)
11758bp
Gene Type
gene
Gene Description (Protein Product)
-
Organism
Phyllostachys edulis
Also AS

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene41150 DNA binding domain
PH02Gene42442 Chitinase class I
PH02Gene42456 Belongs to the universal ribosomal protein uL6 family
Regulatory gene
PH02Gene00185 GAGA binding protein-like family
PH02Gene00315 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
PH02Gene00440 DNA binding

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0002831 regulation of response to biotic stimulus BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0006873 intracellular monoatomic ion homeostasis BP
GO:0006875 obsolete intracellular metal ion homeostasis BP
GO:0008150 biological_process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009608 response to symbiont BP
GO:0009610 response to symbiotic fungus BP
GO:0009620 response to fungus BP
GO:0009623 defense response to fungus BP
GO:0009987 cellular process BP
GO:0019725 cellular homeostasis BP
GO:0030001 metal ion transport BP
GO:0030003 intracellular monoatomic cation homeostasis BP
GO:0031347 regulation of defense response BP
GO:0032101 regulation of response to external stimulus BP
GO:0042592 homeostatic process BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043207 response to external biotic stimulus BP
GO:0043900 obsolete regulation of multi-organism process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0046916 obsolete intracellular transition metal ion homeostasis BP
GO:0048583 regulation of response to stimulus BP
GO:0048878 chemical homeostasis BP
GO:0050789 regulation of biological process BP
GO:0050801 monoatomic ion homeostasis BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0055065 obsolete metal ion homeostasis BP
GO:0055076 obsolete transition metal ion homeostasis BP
GO:0055080 monoatomic cation homeostasis BP
GO:0055082 intracellular chemical homeostasis BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0080134 regulation of response to stress BP
GO:0098771 inorganic ion homeostasis BP
GO:1900150 regulation of defense response to fungus BP