Basic Information
Gene ID
Position
hic_scaffold_4:5460926-5462411 (+)
1485bp
Gene Type
gene
Gene Description (Protein Product)
"Removal of H(2)O(2)
Organism
Also AS AT4G33420

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene42943 cinnamyl alcohol dehydrogenase 1
PH02Gene48202 Alcohol dehydrogenase GroES-like domain
PH02Gene46533 Alcohol dehydrogenase GroES-like domain
Regulatory gene
PH02Gene00185 GAGA binding protein-like family
PH02Gene00304 Dof domain, zinc finger
PH02Gene00562 Dof domain, zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00940 Phenylpropanoid biosynthesis Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.