Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene35358
View in Genome Browser
Position
hic_scaffold_3:7200503-7205717 (-)
5214bp
Gene Type
gene
Gene Description (Protein Product)
Mediator of RNA polymerase II transcription subunit 10
Organism
Phyllostachys edulis
Also AS AT1G26665

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene40938 MED6 mediator sub complex component
PH02Gene38313 mediator of RNA polymerase II transcription subunit
PH02Gene43884 mediator of RNA polymerase II transcription subunit
Regulatory gene
PH02Gene00185 GAGA binding protein-like family
PH02Gene00239 zinc finger
PH02Gene00304 Dof domain, zinc finger

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000428 DNA-directed RNA polymerase complex CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005667 transcription regulator complex CC
GO:0016591 RNA polymerase II, holoenzyme CC
GO:0016592 mediator complex CC
GO:0030880 RNA polymerase complex CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044451 obsolete nucleoplasm part CC
GO:0044464 obsolete cell part CC
GO:0044798 transcription regulator complex CC
GO:0055029 nuclear DNA-directed RNA polymerase complex CC
GO:0061695 transferase complex, transferring phosphorus-containing groups CC
GO:0070013 intracellular organelle lumen CC
GO:0070847 core mediator complex CC
GO:0090575 RNA polymerase II transcription regulator complex CC
GO:1902494 catalytic complex CC
GO:1990234 transferase complex CC