Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene40907
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Position
hic_scaffold_2:30854473-30855844 (-)
1371bp
Gene Type
gene
Gene Description (Protein Product)
Caspase domain
Organism
Phyllostachys edulis
Also AS AT5G04200

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene47760 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PH02Gene42722 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
PH02Gene48246 40S ribosomal protein S6
Regulatory gene
PH02Gene00185 GAGA binding protein-like family
PH02Gene13029 GAGA binding protein-like family
PH02Gene14474 GAGA binding protein-like family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0006508 proteolysis BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008233 peptidase activity MF
GO:0008234 cysteine-type peptidase activity MF
GO:0016787 hydrolase activity MF
GO:0019538 protein metabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0044238 primary metabolic process BP
GO:0048046 apoplast CC
GO:0070011 peptidase activity MF
GO:0071704 organic substance metabolic process BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP