Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene42845
View in Genome Browser
Position
hic_scaffold_3:23905126-23906419 (+)
1293bp
Gene Type
gene
Gene Description (Protein Product)
DNA binding domain
Organism
Phyllostachys edulis
Also AS AT4G31800

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene44242 Belongs to the iron ascorbate-dependent oxidoreductase family
PH02Gene47404 Eukaryotic-type carbonic anhydrase
PH02Gene49938 Protein tyrosine phosphatase, catalytic domain
Regulatory gene
PH02Gene00185 GAGA binding protein-like family
PH02Gene00888 domain associated with HOX domains
PH02Gene00891 regulation of nucleic acid-templated transcription
Target gene
PH02Gene00031 Belongs to the multicopper oxidase family
PH02Gene00122 ABC-2 type transporter
PH02Gene00131 Glutamine amidotransferases class-II

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001101 response to acid chemical BP
GO:0002831 regulation of response to biotic stimulus BP
GO:0002832 negative regulation of response to biotic stimulus BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0008150 biological_process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009620 response to fungus BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009751 response to salicylic acid BP
GO:0010033 response to organic substance BP
GO:0010200 response to chitin BP
GO:0010243 response to organonitrogen compound BP
GO:0014070 response to organic cyclic compound BP
GO:0031347 regulation of defense response BP
GO:0031348 negative regulation of defense response BP
GO:0032101 regulation of response to external stimulus BP
GO:0032102 negative regulation of response to external stimulus BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043900 obsolete regulation of multi-organism process BP
GO:0043901 obsolete negative regulation of multi-organism process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046677 response to antibiotic BP
GO:0048519 negative regulation of biological process BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0065007 biological regulation BP
GO:0080134 regulation of response to stress BP
GO:1900424 regulation of defense response to bacterium BP
GO:1900425 negative regulation of defense response to bacterium BP
GO:1901698 response to nitrogen compound BP
GO:1901700 response to oxygen-containing compound BP