Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene44615
View in Genome Browser
Position
hic_scaffold_23:25483122-25487468 (+)
4346bp
Gene Type
gene
Gene Description (Protein Product)
Beta-eliminating lyase
Organism
Phyllostachys edulis
Also AS AT1G08630

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene45921 Aminotransferase class I and II
PH02Gene46817 Aminotransferase class I and II
PH02Gene46818 Aminotransferase class I and II
Regulatory gene
PH02Gene01001 ethylene-responsive transcription factor
PH02Gene01222 AP2 domain
PH02Gene01223 AP2 domain

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0001505 regulation of neurotransmitter levels BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004793 threonine aldolase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006082 organic acid metabolic process BP
GO:0006520 amino acid metabolic process BP
GO:0006544 glycine metabolic process BP
GO:0006545 glycine biosynthetic process BP
GO:0006566 threonine metabolic process BP
GO:0006567 threonine catabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008652 amino acid biosynthetic process BP
GO:0008732 L-allo-threonine aldolase activity MF
GO:0009056 catabolic process BP
GO:0009058 biosynthetic process BP
GO:0009063 amino acid catabolic process BP
GO:0009066 aspartate family amino acid metabolic process BP
GO:0009068 aspartate family amino acid catabolic process BP
GO:0009069 serine family amino acid metabolic process BP
GO:0009070 serine family amino acid biosynthetic process BP
GO:0009987 cellular process BP
GO:0016053 organic acid biosynthetic process BP
GO:0016054 organic acid catabolic process BP
GO:0016829 lyase activity MF
GO:0016830 carbon-carbon lyase activity MF
GO:0016832 aldehyde-lyase activity MF
GO:0017144 xenobiotic metabolic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0042133 neurotransmitter metabolic process BP
GO:0042136 neurotransmitter biosynthetic process BP
GO:0043436 oxoacid metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044282 small molecule catabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046394 carboxylic acid biosynthetic process BP
GO:0046395 carboxylic acid catabolic process BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071704 organic substance metabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901575 organic substance catabolic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901605 alpha-amino acid metabolic process BP
GO:1901606 alpha-amino acid catabolic process BP
GO:1901607 alpha-amino acid biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00260 Glycine, serine and threonine metabolism Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].