Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene44753
View in Genome Browser
Position
hic_scaffold_18:6527430-6530957 (+)
3527bp
Gene Type
gene
Gene Description (Protein Product)
Possesses calcium-dependent ppGpp (guanosine 3'- diphosphate 5'-diphosphate) synthetase activity in vitro and is able to functionally complement E.coli relA mutants. May be involved in a rapid plant ppGpp-mediated response to pathogens and other stresses
Organism
Phyllostachys edulis
Also AS AT3G17470

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene46251 GTP cyclohydrolase I
PH02Gene46404 Belongs to the pyruvate kinase family
PH02Gene47306 TGS domain
Regulatory gene
PH02Gene00185 GAGA binding protein-like family
PH02Gene01001 ethylene-responsive transcription factor
PH02Gene01222 AP2 domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0008728 GTP diphosphokinase activity MF
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016778 diphosphotransferase activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00230 Purine metabolism -