PPGR - Gene Detail

Gene ID	PH02Gene45592 View in Genome Browser
Position	hic_scaffold_3:63227244-63230587 (+) 3343bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
Organism	Phyllostachys edulis
Also AS	AT3G04120

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	PH02Gene48974 Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis PH02Gene45592 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family PH02Gene49046 Eukaryotic porin
Regulatory gene	PH02Gene00810 Helix-loop-helix DNA-binding domain PH02Gene00899 Helix-loop-helix DNA-binding domain PH02Gene01001 ethylene-responsive transcription factor

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0000166	nucleotide binding	MF
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004365	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0006950	response to stress	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009266	response to temperature stimulus	BP
GO:0009408	response to heat	BP
GO:0009628	response to abiotic stimulus	BP
GO:0016491	oxidoreductase activity	MF
GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	MF
GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	MF
GO:0032991	protein-containing complex	CC
GO:0034059	response to anoxia	BP
GO:0036094	small molecule binding	MF
GO:0036293	response to decreased oxygen levels	BP
GO:0042301	phosphate ion binding	MF
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043891	glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity	MF
GO:0048037	obsolete cofactor binding	MF
GO:0050662	obsolete coenzyme binding	MF
GO:0050896	response to stimulus	BP
GO:0051287	NAD binding	MF
GO:0055114	obsolete oxidation-reduction process	BP
GO:0070403	NAD+ binding	MF
GO:0070482	response to oxygen levels	BP
GO:0097159	organic cyclic compound binding	MF
GO:1901265	nucleoside phosphate binding	MF
GO:1901363	heterocyclic compound binding	MF

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00710	Carbon fixation in photosynthetic organisms	-
map00010	Glycolysis / Gluconeogenesis	Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which often corresponds to operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].