Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene46933
View in Genome Browser
Position
hic_scaffold_3694:7515-12009 (-)
4494bp
Gene Type
gene
Gene Description (Protein Product)
Aminotransferase class I and II
Organism
Phyllostachys edulis
Also AS AT5G23670

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
PH02Gene00185 GAGA binding protein-like family
PH02Gene13029 GAGA binding protein-like family
PH02Gene14474 GAGA binding protein-like family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0002178 palmitoyltransferase complex CC
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004758 serine C-palmitoyltransferase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005783 endoplasmic reticulum CC
GO:0005789 endoplasmic reticulum membrane CC
GO:0006066 alcohol metabolic process BP
GO:0006629 lipid metabolic process BP
GO:0006643 membrane lipid metabolic process BP
GO:0006644 phospholipid metabolic process BP
GO:0006665 sphingolipid metabolic process BP
GO:0006667 sphinganine metabolic process BP
GO:0006670 sphingosine metabolic process BP
GO:0006672 ceramide metabolic process BP
GO:0006684 sphingomyelin metabolic process BP
GO:0006686 sphingomyelin biosynthetic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008610 lipid biosynthetic process BP
GO:0008654 phospholipid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009555 pollen development BP
GO:0009628 response to abiotic stimulus BP
GO:0009639 response to red or far red light BP
GO:0009640 photomorphogenesis BP
GO:0009791 post-embryonic development BP
GO:0009893 positive regulation of metabolic process BP
GO:0009894 regulation of catabolic process BP
GO:0009896 positive regulation of catabolic process BP
GO:0009987 cellular process BP
GO:0010506 regulation of autophagy BP
GO:0010508 positive regulation of autophagy BP
GO:0010941 regulation of cell death BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016239 positive regulation of macroautophagy BP
GO:0016241 regulation of macroautophagy BP
GO:0016408 C-acyltransferase activity MF
GO:0016409 palmitoyltransferase activity MF
GO:0016454 C-palmitoyltransferase activity MF
GO:0016740 transferase activity MF
GO:0016746 acyltransferase activity MF
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups MF
GO:0017059 serine C-palmitoyltransferase complex CC
GO:0019222 regulation of metabolic process BP
GO:0019637 organophosphate metabolic process BP
GO:0019751 polyol metabolic process BP
GO:0030148 sphingolipid biosynthetic process BP
GO:0031211 endoplasmic reticulum palmitoyltransferase complex CC
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031329 regulation of cellular catabolic process BP
GO:0031331 positive regulation of cellular catabolic process BP
GO:0031984 organelle subcompartment CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032991 protein-containing complex CC
GO:0034311 diol metabolic process BP
GO:0034312 diol biosynthetic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0043067 regulation of programmed cell death BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043603 amide metabolic process BP
GO:0043604 amide biosynthetic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046165 alcohol biosynthetic process BP
GO:0046173 polyol biosynthetic process BP
GO:0046467 membrane lipid biosynthetic process BP
GO:0046511 sphinganine biosynthetic process BP
GO:0046512 sphingosine biosynthetic process BP
GO:0046513 ceramide biosynthetic process BP
GO:0046519 sphingoid metabolic process BP
GO:0046520 sphingoid biosynthetic process BP
GO:0048229 gametophyte development BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0065007 biological regulation BP
GO:0071704 organic substance metabolic process BP
GO:0090407 organophosphate biosynthetic process BP
GO:0097164 ammonium ion metabolic process BP
GO:0098796 membrane protein complex CC
GO:0098827 endoplasmic reticulum subcompartment CC
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901615 organic hydroxy compound metabolic process BP
GO:1901617 organic hydroxy compound biosynthetic process BP
GO:1902494 catalytic complex CC
GO:1904502 regulation of lipophagy BP
GO:1904504 positive regulation of lipophagy BP
GO:1905961 protein-cysteine S-palmitoyltransferase complex CC
GO:1990234 transferase complex CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00600 Sphingolipid metabolism -