Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene48620
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Position
hic_scaffold_17:64561236-64564047 (-)
2811bp
Gene Type
gene
Gene Description (Protein Product)
Cofactor assembly of complex C subunit B
Organism
Phyllostachys edulis
Also AS AT3G26710

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene49204 Non-specific serine threonine protein kinase
PH02Gene50067 Photosynthesis system II assembly factor YCF48
PH02Gene49405 Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Regulatory gene
PH02Gene00094 Lateral organ boundaries (LOB) domain
PH02Gene00185 GAGA binding protein-like family
PH02Gene00718 Histone-lysine N-methyltransferase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0008150 biological_process BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009987 cellular process BP
GO:0010190 cytochrome b6f complex assembly BP
GO:0016043 cellular component organization BP
GO:0017004 cytochrome complex assembly BP
GO:0022607 cellular component assembly BP
GO:0034622 protein-containing complex assembly BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0065003 protein-containing complex assembly BP
GO:0071840 cellular component organization or biogenesis BP